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    BF9343_RS07775 site-specific integrase [ Bacteroides fragilis NCTC 9343 ]

    Gene ID: 60369928, updated on 11-Dec-2024

    Summary

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    Gene symbol
    BF9343_RS07775
    Gene description
    site-specific integrase
    Locus tag
    BF9343_RS07775
    Gene type
    protein coding
    Organism
    Bacteroides fragilis NCTC 9343 (strain: NCTC 9343, culture-collection: ATCC:25285, culture-collection: NCTC:9343, type-material: type strain of Bacteroides fragilis)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    BF9343_1604
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    Genomic context

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    Sequence:
    NC_003228.3 (1962133..1963275)

    NC_003228.3Genomic Context describing neighboring genes Neighboring gene carboxypeptidase regulatory-like domain-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DUF3869 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003228.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive DNA inversions in the B. fragilis genome control variable gene expression. Cerdeño-Tárraga AM, et al. Science, 2005 Mar 4. PMID 15746427
    2. The integrase family of recombinase: organization and function of the active site. Grainge I, et al. Mol Microbiol, 1999 Aug. PMID 10577069
    3. Structure and mechanism in site-specific recombination. Gopaul DN, et al. Curr Opin Struct Biol, 1999 Feb. PMID 10047575
    4. The integrase family of tyrosine recombinases: evolution of a conserved active site domain. Esposito D, et al. Nucleic Acids Res, 1997 Sep 15. PMID 9278480, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    site-specific integrase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003228.3 Reference assembly

      Range
      1962133..1963275
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005786550.1 MULTISPECIES: site-specific integrase [Bacteroides]

      See identical proteins and their annotated locations for WP_005786550.1

      UniProtKB/TrEMBL
      A0A016AQP8, A0A0E2B3L7, A0A2M9UR59, A0AAN4MWY6, A0AAV3MX83, A0AAV3NEE5, F7LNS9
    Nucleotide Protein
    Heading Accession and Version