U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PSPTO_RS09070 GGDEF domain-containing protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1183376, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PSPTO_RS09070
    Gene description
    GGDEF domain-containing protein
    Locus tag
    PSPTO_RS09070
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO1739; PSPTO_1739
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_004578.1 (1907254..1908180, complement)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene EAL domain-containing protein Neighboring gene TenA family transcriptional regulator Neighboring gene YciK family oxidoreductase Neighboring gene N-acetylmuramic acid 6-phosphate phosphatase MupP

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phenotypic convergence mediated by GGDEF-domain-containing proteins. Simm R, et al. J Bacteriol, 2005 Oct. PMID 16166544, Free PMC Article
    2. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    GGDEF domain-containing protein
    WP_005766730.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      1907254..1908180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005766730.1 MULTISPECIES: GGDEF domain-containing protein [Pseudomonas]

      See identical proteins and their annotated locations for WP_005766730.1

      UniProtKB/TrEMBL
      A0A0N0WM20, A0A3M3ZAH3, A0A3M4SJT0, A0A3M5RMI5, A0AAP6MHK5, A0AAU8M635, A0AAW4E7P2, Q885U2
      Conserved Domains (1) summary
      cd01949
      Location:148 → 303
      GGDEF; Diguanylate-cyclase (DGC) or GGDEF domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases