U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PSPTO_RS08915 C40 family peptidase [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1183343, updated on 31-Jan-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PSPTO_RS08915
    Gene description
    C40 family peptidase
    Locus tag
    PSPTO_RS08915
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO1706; PSPTO_1706
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_004578.1 (1875977..1876522)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene NAD-dependent deacylase Neighboring gene DnaA regulatory inactivator Hda Neighboring gene C40 family peptidase Neighboring gene sorbosone dehydrogenase family protein Neighboring gene cob(I)yrinic acid a,c-diamide adenosyltransferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evolutionary lines of cysteine peptidases. Barrett AJ, et al. Biol Chem, 2001 May. PMID 11517925
    2. Evolutionary history, structural features and biochemical diversity of the NlpC/P60 superfamily of enzymes. Anantharaman V, et al. Genome Biol, 2003. PMID 12620121, Free PMC Article
    3. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    C40 family peptidase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      1875977..1876522
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005766666.1 MULTISPECIES: C40 family peptidase [Pseudomonas syringae group]

      UniProtKB/TrEMBL
      A0A0N0WX20, Q885X5
      Conserved Domains (1) summary
      COG0791
      Location:47 → 168
      Spr; Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases