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    HMPREF0179_RS12085 RNA repair transcriptional activator RtcR family protein [ Bilophila wadsworthia 3_1_6 ]

    Gene ID: 78086352, updated on 13-Dec-2024

    Summary

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    Gene symbol
    HMPREF0179_RS12085
    Gene description
    RNA repair transcriptional activator RtcR family protein
    Locus tag
    HMPREF0179_RS12085
    Gene type
    protein coding
    Organism
    Bilophila wadsworthia 3_1_6 (strain: 3_1_6, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Bilophila
    Old locus tag
    HMPREF0179_01220
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    Genomic context

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    NZ_KE150238.1Genomic Context describing neighboring genes Neighboring gene indolepyruvate oxidoreductase subunit beta Neighboring gene LysE family translocator Neighboring gene hypothetical protein Neighboring gene NifB/NifX family molybdenum-iron cluster-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_KE150238.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the Escherichia coli RNA 3'-terminal phosphate cyclase and its sigma54-regulated operon. Genschik P, et al. J Biol Chem, 1998 Sep 25. PMID 9738023
    2. Domain architectures of sigma54-dependent transcriptional activators. Studholme DJ, et al. J Bacteriol, 2003 Mar. PMID 12618438, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    RNA repair transcriptional activator RtcR family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_KE150238.1 Reference assembly

      Range
      2735174..2736796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005026183.1 RNA repair transcriptional activator RtcR family protein [Bilophila wadsworthia]

      See identical proteins and their annotated locations for WP_005026183.1

      UniProtKB/TrEMBL
      E5Y4V7
      Conserved Domains (1) summary
      COG4650
      Location:17 → 536
      RtcR; Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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