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    Bovatus_RS19635 porin family protein [ Bacteroides ovatus ]

    Gene ID: 29455163, updated on 3-Dec-2024

    Summary

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    Gene symbol
    Bovatus_RS19635
    Gene description
    porin family protein
    Locus tag
    Bovatus_RS19635
    Gene type
    protein coding
    Organism
    Bacteroides ovatus (strain: ATCC 8483, nat-host: Homo sapiens, culture-collection: ATCC:8483, type-material: type strain of Bacteroides ovatus)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    Bovatus_04018
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    Genomic context

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    NZ_CP012938.1Genomic Context describing neighboring genes Neighboring gene M56 family metallopeptidase Neighboring gene BlaI/MecI/CopY family transcriptional regulator Neighboring gene ABC transporter permease Neighboring gene ABC transporter permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Porins and small-molecule translocation across the outer membrane of Gram-negative bacteria. Vergalli J, et al. Nat Rev Microbiol, 2020 Mar. PMID 31792365
    2. Outer Membrane Porins. Masi M, et al. Subcell Biochem, 2019. PMID 31214985
    3. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    porin family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012938.1 Reference assembly

      Range
      5207494..5208063
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004314733.1 MULTISPECIES: porin family protein [Bacteroides]

      See identical proteins and their annotated locations for WP_004314733.1

      UniProtKB/TrEMBL
      A0A0J9FLS4, A0A1F0J360, A0A1G8EDZ2, A0A1H4DZS2, A0A372Z1S1, A0A373GCS1, A0A373GMC8, A0A3A5QDS7, A0A3A5S2W0, A0A3A5THZ5, A0A3A6MH05, A0A412CZ72, A0A943J6S8, F7M301, I9V070, W6PHV6
      Conserved Domains (1) summary
      pfam13505
      Location:5 → 189
      OMP_b-brl; Outer membrane protein beta-barrel domain
    Nucleotide Protein
    Heading Accession and Version