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    rpe ribulose-phosphate 3-epimerase [ Bacteroides xylanisolvens ]

    Gene ID: 69483495, updated on 6-Jun-2024

    Summary

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    Gene symbol
    rpe
    Gene description
    ribulose-phosphate 3-epimerase
    Locus tag
    INE92_RS24080
    Gene type
    protein coding
    Organism
    Bacteroides xylanisolvens (strain: CL11T00C03, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    INE92_04798
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    Genomic context

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    NZ_CP072216.1Genomic Context describing neighboring genes Neighboring gene chloride channel protein Neighboring gene methionyl-tRNA formyltransferase Neighboring gene ComEC/Rec2 family competence protein Neighboring gene bifunctional oligoribonuclease/PAP phosphatase NrnA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP072216.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of D-ribulose 5-phosphate 3-epimerase from Synechocystis to 1.6 A resolution. Wise EL, et al. Acta Crystallogr D Biol Crystallogr, 2004 Sep. PMID 15333955
    2. Iron enzyme ribulose-5-phosphate 3-epimerase in Escherichia coli is rapidly damaged by hydrogen peroxide but can be protected by manganese. Sobota JM, et al. Proc Natl Acad Sci U S A, 2011 Mar 29. PMID 21402925, Free PMC Article
    3. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    ribulose-phosphate 3-epimerase
    WP_004313068.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP072216.1 Reference assembly

      Range
      5863625..5864275
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004313068.1 MULTISPECIES: ribulose-phosphate 3-epimerase [Bacteroidaceae]

      See identical proteins and their annotated locations for WP_004313068.1

      UniProtKB/TrEMBL
      A0A174DDI3, A0A943J636, D0TUG0, D6D0X8, D7IZV8
      Conserved Domains (1) summary
      cd00429
      Location:4 → 214
      RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...
    Nucleotide Protein
    Heading Accession and Version

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