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    rsfS ribosome silencing factor [ Bacteroides xylanisolvens ]

    Gene ID: 69483568, updated on 3-Dec-2024

    Summary

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    Gene symbol
    rsfS
    Gene description
    ribosome silencing factor
    Locus tag
    INE92_RS24460
    Gene type
    protein coding
    Organism
    Bacteroides xylanisolvens (strain: CL11T00C03, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    INE92_04872
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    Genomic context

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    NZ_CP072216.1Genomic Context describing neighboring genes Neighboring gene phosphatidate cytidylyltransferase Neighboring gene ATP-dependent zinc metalloprotease FtsH Neighboring gene tRNA-Gln Neighboring gene DUF349 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP072216.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping of promoters for the nucleus-encoded plastid RNA polymerase (NEP) in the iojap maize mutant. Silhavy D, et al. Curr Genet, 1998 May. PMID 9618584
    2. C7orf30 specifically associates with the large subunit of the mitochondrial ribosome and is involved in translation. Wanschers BF, et al. Nucleic Acids Res, 2012 May. PMID 22238375, Free PMC Article
    3. RsfA (YbeB) proteins are conserved ribosomal silencing factors. Häuser R, et al. PLoS Genet, 2012. PMID 22829778, Free PMC Article
    4. Identification of novel Escherichia coli ribosome-associated proteins using isobaric tags and multidimensional protein identification techniques. Jiang M, et al. J Bacteriol, 2007 May. PMID 17337586, Free PMC Article
    5. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    ribosome silencing factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP072216.1 Reference assembly

      Range
      5966233..5966592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004310984.1 MULTISPECIES: ribosome silencing factor [Bacteroides]

      See identical proteins and their annotated locations for WP_004310984.1

      UniProtKB/TrEMBL
      A0A0J9ICF2, A0A139L711, A0A174DMD4, A0A372Z187, A0A3A5QBT7, A0A3A5TML8, A0A9E0ZC39, D0TUM3, D4VF62, D6D139, F7M3D6, I9ALK7
      Conserved Domains (1) summary
      pfam02410
      Location:9 → 107
      RsfS; Ribosomal silencing factor during starvation
    Nucleotide Protein
    Heading Accession and Version