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    Bovatus_RS21370 LiaF transmembrane domain-containing protein [ Bacteroides ovatus ]

    Gene ID: 29452557, updated on 9-Jan-2025

    Summary

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    Gene symbol
    Bovatus_RS21370
    Gene description
    LiaF transmembrane domain-containing protein
    Locus tag
    Bovatus_RS21370
    Gene type
    protein coding
    Organism
    Bacteroides ovatus (strain: ATCC 8483, nat-host: Homo sapiens, culture-collection: ATCC:8483, type-material: type strain of Bacteroides ovatus)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    Bovatus_04369
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    Genomic context

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    NZ_CP012938.1Genomic Context describing neighboring genes Neighboring gene RagB/SusD family nutrient uptake outer membrane protein Neighboring gene SusC/RagA family TonB-linked outer membrane protein Neighboring gene LytTR family DNA-binding domain-containing protein Neighboring gene pectate lyase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. Wu M, et al. Science, 2015 Oct 2. PMID 26430127, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LiaF transmembrane domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012938.1 Reference assembly

      Range
      5647001..5647795
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004301517.1 MULTISPECIES: LiaF transmembrane domain-containing protein [Bacteroides]

      See identical proteins and their annotated locations for WP_004301517.1

      UniProtKB/TrEMBL
      A0A139L7A4, A0A1F0IYS9, A0A373GI51, A0AAN3A3D7, C3R2X2, E5C6E0
      Conserved Domains (3) summary
      COG1030
      Location:30 → 109
      NfeD; Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
      pfam18917
      Location:17 → 59
      DUF5668; Domain of unknown function (DUF5668)
      cl19753
      Location:180 → 262
      DUF2154; Cell wall-active antibiotics response 4TMS YvqF
    Nucleotide Protein
    Heading Accession and Version

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