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    A6J42_RS16805 porin OmpL1 [ Leptospira interrogans serovar Copenhageni ]

    Gene ID: 61144297, updated on 3-Dec-2024

    Summary

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    Gene symbol
    A6J42_RS16805
    Gene description
    porin OmpL1
    Locus tag
    A6J42_RS16805
    Gene type
    protein coding
    Organism
    Leptospira interrogans serovar Copenhageni (strain: FDAARGOS_203, serovar: Copenhageni, nat-host: Homo sapiens, culture-collection: ATCC:BAA-1198D-5, culture-collection: FDA:FDAARGOS_203)
    Lineage
    Bacteria; Spirochaetota; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira
    Old locus tag
    A6J42_17145
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    Genomic context

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    NZ_CP020414.2Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase family protein Neighboring gene cytochrome c peroxidase Neighboring gene pseudo Neighboring gene acetyl-CoA C-acetyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP020414.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the leptospiral outer membrane and description of three novel leptospiral membrane proteins. Haake DA, et al. Infect Immun, 2002 Sep. PMID 12183539, Free PMC Article
    2. Complete Genome Sequence of a Virulent Leptospira interrogans Serovar Copenhageni Strain, Assembled with a Combination of Nanopore and Illumina Reads. Llanes A, et al. Microbiol Resour Announc, 2020 Apr 23. PMID 32327507, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    porin OmpL1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP020414.2 Reference assembly

      Range
      3463268..3464230 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002072562.1 MULTISPECIES: porin OmpL1 [Leptospira]

      See identical proteins and their annotated locations for WP_002072562.1

      UniProtKB/TrEMBL
      A0A6G9ECI1, A0A7G3K749, A0A7G3K764, A0A7G3KC31, A0AA40WC84, M6G397, Q6GXE1, Q6GXE2, Q6S9L2, Q72TP4
      Conserved Domains (1) summary
      pfam11389
      Location:25 → 320
      Porin_OmpL1; Leptospira porin protein OmpL1
    Nucleotide Protein
    Heading Accession and Version