slc25a3b solute carrier family 25 member 3b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: slc25a3bprovided by ZNC
Official Full Name: solute carrier family 25 member 3bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1916
See related: Ensembl:ENSDARG00000025566 AllianceGenome:ZFIN:ZDB-GENE-040426-1916
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: slc25a3; zgc:56226; zgc:85664; wu:fb59a06
Summary: Predicted to enable phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Predicted to act upstream of or within mitochondrial phosphate ion transmembrane transport. Predicted to be located in membrane. Predicted to be active in mitochondrial inner membrane. Is expressed in several structures, including digestive system; endocrine system; epidermis; nervous system; and pectoral fin. Orthologous to human SLC25A3 (solute carrier family 25 member 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 25

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	25	NC_007136.7 (3306741..3321365)
105	previous assembly	GRCz10 (GCF_000002035.5)	25	NC_007136.6 (3180941..3195621)

Chromosome 25 - NC_007136.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb19d09.y1 (e-PCR)
- UniSTS:190259

fb59a06.x1 (e-PCR)
- UniSTS:203338

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables phosphate transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info
enables phosphate transmembrane transporter activity	IEA Inferred from Electronic Annotation more info
enables symporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within mitochondrial phosphate ion transmembrane transport	IEA Inferred from Electronic Annotation more info
involved_in phosphate ion transmembrane transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in mitochondrial inner membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: solute carrier family 25 member 3b

Names: solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 3; solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3; solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_213722.1 → NP_998887.1 solute carrier family 25 member 3b

See identical proteins and their annotated locations for NP_998887.1

Status: PROVISIONAL

Source sequence(s)

BC046007

UniProtKB/TrEMBL

Q7ZV45

Related

ENSDARP00000033622.5, ENSDART00000034704.7

Conserved Domains (2) summary

PTZ00169
Location:65 → 331

PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

pfam00153
Location:55 → 146

Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007136.7 Reference GRCz11 Primary Assembly

Range

3306741..3321365

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005170654.4 → XP_005170711.1 solute carrier family 25 member 3b isoform X1

UniProtKB/TrEMBL

A0A2R8RYH8, A0A8M2BI03

Related

ENSDARP00000156002.1, ENSDART00000182085.1

Conserved Domains (2) summary

PTZ00169
Location:64 → 330

PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

pfam00153
Location:54 → 145

Mito_carr; Mitochondrial carrier protein