U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC5514652 transcription factor COE3 [ Nematostella vectensis (starlet sea anemone) ]

    Gene ID: 5514652, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC5514652
    Gene description
    transcription factor COE3
    Locus tag
    NEMVEDRAFT_v1g164975
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematostella vectensis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC5514652 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current jaNemVect1.1 (GCF_932526225.1) 6 NC_064039.1 (2884175..2891471)
    100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834359.1 (508356..515495)

    Chromosome 6 - NC_064039.1Genomic Context describing neighboring genes Neighboring gene CUB and peptidase domain-containing protein 2 Neighboring gene coiled-coil domain-containing protein 186 Neighboring gene QWRF motif-containing protein 9 Neighboring gene uncharacterized LOC116619463 Neighboring gene serine/threonine-protein kinase 38-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription factor COE3
    Names
    predicted protein
    trancription factor COE

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference jaNemVect1.1

    Genomic

    1. NC_064039.1 Reference jaNemVect1.1

      Range
      2884175..2891471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001634712.3 → XP_001634762.2  transcription factor COE3

      UniProtKB/TrEMBL
      A7S0M6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials