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    tssJ type VI secretion system lipoprotein TssJ [ Shigella boydii ]

    Gene ID: 75205530, updated on 3-Dec-2024

    Summary

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    Gene symbol
    tssJ
    Gene description
    type VI secretion system lipoprotein TssJ
    Locus tag
    CEH00_RS19585
    Gene type
    protein coding
    Organism
    Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    CEH00_19610
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    Genomic context

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    NZ_NIYS01000123.1Genomic Context describing neighboring genes Neighboring gene Hcp family type VI secretion system effector Neighboring gene pseudo Neighboring gene type VI secretion system-associated FHA domain protein TagH Neighboring gene type VI secretion system baseplate subunit TssG Neighboring gene type VI secretion system baseplate subunit TssF Neighboring gene type VI secretion system baseplate subunit TssE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_NIYS01000123.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
    2. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type VI secretion system lipoprotein TssJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_NIYS01000123.1 Reference assembly

      Range
      4229..4753 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_001080149.1 MULTISPECIES: type VI secretion system lipoprotein TssJ [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_001080149.1

      UniProtKB/TrEMBL
      A0A0E0Y3I7, A0A0J3W8G1, A0A1X3IBC4, A0A1X3JMG5, A0A236UEC4, A0A6H2GI60, A0A7M3S2E7, A0A7U9P168, A0A7Z1EPD9, A0A7Z8FFF8, A0A829LAK4, A0A836NE18, A0A9P2IDN1, A0AAD2UF42, A0AAD2VBP6, A0AAD2VMG7, A0AAN1S2I1, A0AAN3M722, A0AAN3V3A4, A0AAN3ZHJ6, A0AAP9MMB2, B7LHD2, B8ZYU5, E0J661, W1ES33
      Conserved Domains (1) summary
      COG3521
      Location:1 → 174
      COG3521; Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein
    Heading Accession and Version