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    yhaJ DNA-binding transcriptional regulator YhaJ [ Shigella dysenteriae ]

    Gene ID: 75173279, updated on 3-Dec-2024

    Summary

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    Gene symbol
    yhaJ
    Gene description
    DNA-binding transcriptional regulator YhaJ
    Locus tag
    HUZ68_RS19795
    Gene type
    protein coding
    Organism
    Shigella dysenteriae (strain: SWHEFF_49)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
    Old locus tag
    HUZ68_19625
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    Genomic context

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    NZ_CP055055.1Genomic Context describing neighboring genes Neighboring gene DUF805 domain-containing protein Neighboring gene DUF805 domain-containing protein Neighboring gene pirin family protein Neighboring gene protein YhaL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP055055.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Highly Conserved Escherichia coli Transcription Factor YhaJ Regulates Aromatic Compound Degradation. Palevsky N, et al. Front Microbiol, 2016. PMID 27713734, Free PMC Article
    2. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    3. High-resolution genomic surveillance elucidates a multilayered hierarchical transfer of resistance between WWTP- and human/animal-associated bacteria. Che Y, et al. Microbiome, 2022 Jan 25. PMID 35078531, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DNA-binding transcriptional regulator YhaJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP055055.1 Reference assembly

      Range
      4155491..4156387 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_001041009.1 MULTISPECIES: DNA-binding transcriptional regulator YhaJ [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_001041009.1

      UniProtKB/Swiss-Prot
      P42623, P67660, P67661, Q2M9A1
      UniProtKB/TrEMBL
      A0A0H3PSL4, A0A1X3IXX2, A0A1X3JC43, A0A236FXQ8, A0A4P8C0Z6, A0A7I6H6T1, A0A7U9Q9D4, A0A9P2R2I7, A0A9Q6V211, A0AAE5N5M6, A0AAN1ADU0, A0AAN4CNK8, A0AAN4SWG5, A0AAV3H5E3, A0AAV3I1H2, C3STH3
      Conserved Domains (2) summary
      pfam00126
      Location:9 → 68
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
      cl21456
      Location:99 → 291
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    Nucleotide Protein
    Heading Accession and Version

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