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    ydaS toxin YdaS [ Escherichia marmotae ]

    Gene ID: 86946547, updated on 10-Oct-2024

    Summary

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    Gene symbol
    ydaS
    Gene description
    toxin YdaS
    Locus tag
    J8I93_RS11165
    Gene type
    protein coding
    RefSeq status
    PIPELINE
    Organism
    Escherichia marmotae (strain: YF8, serotype: O4:H56, nat-host: Canis lupus familiaris)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Old locus tag
    J8I93_11055
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    Genomic context

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    NZ_CP072689.1Genomic Context describing neighboring genes Neighboring gene YdaU family protein Neighboring gene toxin YdaT family protein Neighboring gene DNA-binding transcriptional repressor RacR Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP072689.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Repression of YdaS Toxin Is Mediated by Transcriptional Repressor RacR in the Cryptic rac Prophage of Escherichia coli K-12. Krishnamurthi R, et al. mSphere, 2017 Nov-Dec. PMID 29205228, Free PMC Article
    2. CRISPR-Cas-Mediated Gene Silencing Reveals RacR To Be a Negative Regulator of YdaS and YdaT Toxins in Escherichia coli K-12. Bindal G, et al. mSphere, 2017 Nov-Dec. PMID 29205229, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    toxin YdaS

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP072689.1 Reference assembly

      Range
      2377525..2377821 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000712069.1 MULTISPECIES: toxin YdaS [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_000712069.1

      Status: PIPELINE

      UniProtKB/Swiss-Prot
      P76063, Q2MBE4
      UniProtKB/TrEMBL
      A0A094VXH7, A0A2H4ZI59, A0A370V7T1, A0AAD2NVJ6, A0AAN3M7W9, A0AAP9MKX2, W0FPD2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    AAC74439.1