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    HMGB2 high mobility group box 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

    Gene ID: 101125800, updated on 1-Oct-2024

    Summary

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    Gene symbol
    HMGB2
    Gene description
    high mobility group box 2
    See related
    Ensembl:ENSGGOG00000015882
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gorilla gorilla gorilla (sub-species: gorilla)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
    Orthologs
    human mouse all
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    Genomic context

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    See HMGB2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 3 NC_073227.2 (194303994..194306715, complement)
    RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 4 NC_073228.1 (187180544..187183254, complement)

    Chromosome 3 - NC_073227.2Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene uncharacterized LOC109026440 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene uncharacterized LOC129533148 Neighboring gene uncharacterized LOC129533147

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding, bending IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group protein B2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073227.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

      Range
      194303994..194306715 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004040632.5 → XP_004040680.1  high mobility group protein B2

      See identical proteins and their annotated locations for XP_004040680.1

      UniProtKB/TrEMBL
      G3RII6
      Conserved Domains (2) summary
      pfam00505
      Location:95 → 162
      HMG_box; HMG (high mobility group) box
      pfam09011
      Location:6 → 78
      HMG_box_2; HMG-box domain

    2. XM_063705646.1 → XP_063561716.1  high mobility group protein B2

      UniProtKB/TrEMBL
      G3RII6
    Nucleotide Protein
    Heading Accession and Version

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