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    Nucleotidylyl transferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830732, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleotidylyl transferase superfamily protein
    Primary source
    TAIR:AT5G08340
    Locus tag
    AT5G08340
    See related
    Araport:AT5G08340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L15.70; F8L15_70
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (2683782..2687416)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TCP family transcription factor Neighboring gene Isoprenylcysteine carboxyl methyltransferase (ICMT) family Neighboring gene GRAM domain-containing protein / ABA-responsive protein-like protein Neighboring gene Stu1, putative (DUF789) Neighboring gene alpha-galactosidase 2 Neighboring gene alpha-galactosidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Flavin nucleotide metabolism in plants: monofunctional enzymes synthesize fad in plastids. Sandoval FJ, et al. J Biol Chem, 2008 Nov 7. PMID 18713732, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_120918.5
    NM_203022.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables FMN adenylyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables FMN adenylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in FAD biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in FAD biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in riboflavin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Nucleotidylyl transferase superfamily protein
    NP_568192.2
    • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974751.1
    • Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: FMN adenylyltransferase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), FAD synthetase (InterPro:IPR015864); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G23330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2683782..2687416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120918.5 → NP_568192.2  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568192.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8VZR0
      UniProtKB/TrEMBL
      A0A178UCW1, A0A654FZM9
      Conserved Domains (1) summary
      cl00015
      Location:102 → 289
      nt_trans; nucleotidyl transferase superfamily

    2. NM_203022.3 → NP_974751.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974751.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UCW1, F4KB09
      Conserved Domains (1) summary
      cl00015
      Location:102 → 289
      nt_trans; nucleotidyl transferase superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZR0.1

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