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    TET10 tetraspanin10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842632, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TET10
    Official Full Name
    tetraspanin10
    Primary source
    TAIR:AT1G63260
    Locus tag
    AT1G63260
    See related
    Araport:AT1G63260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9N12.12; F9N12_12; tetraspanin10
    Summary
    Member of TETRASPANIN family
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    Genomic context

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    See TET10 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (23466700..23469289, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CLAVATA3/ESR-RELATED 14 Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene non-intrinsic ABC protein 10 Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene Aldolase-type TIM barrel family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036145.3
    NM_001334076.1
    NM_001334077.1
    NM_105005.5
    NM_202348.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in auxin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    tetraspanin10
    NP_001031222.1
    • tetraspanin10 (TET10); INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin3 (TAIR:AT3G45600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_176515.3
    • tetraspanin10 (TET10); INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin3 (TAIR:AT3G45600.1); Has 817 Blast hits to 814 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 379; Fungi - 0; Plants - 422; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
    NP_974077.1
    • tetraspanin10 (TET10); INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23466700..23469289 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334075.1 → NP_001320678.1  tetraspanin10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJK4, A0A1P8ANM1, A0A384L7T8

    2. NM_202348.3 → NP_974077.1  tetraspanin10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974077.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WT02, A0A654EMA6
      Conserved Domains (1) summary
      pfam00335
      Location:8 → 238
      Tetraspannin; Tetraspanin family

    3. NM_001036145.3 → NP_001031222.1  tetraspanin10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031222.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WT02
      Conserved Domains (2) summary
      pfam00335
      Location:8 → 126
      Tetraspannin; Tetraspanin family
      pfam16214
      Location:16 → 92
      AC_N; Adenylyl cyclase N-terminal extracellular and transmembrane region

    4. NM_105005.5 → NP_176515.3  tetraspanin10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176515.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DFW6, F4I213, F4I214, Q0WS10, Q6NLS7, Q9C8T0
      UniProtKB/TrEMBL
      A0A5S9WT02
      Conserved Domains (2) summary
      pfam00335
      Location:8 → 250
      Tetraspannin; Tetraspanin family
      pfam08592
      Location:3 → 99
      DUF1772; Domain of unknown function (DUF1772)

    5. NM_001334077.1 → NP_001320676.1  tetraspanin10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DFW6, F4I213, F4I214, Q0WS10, Q6NLS7, Q9C8T0
      UniProtKB/TrEMBL
      A0A5S9WT02

    6. NM_001334076.1 → NP_001320677.1  tetraspanin10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANL3, A0A5S9WT02
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I214.1

    Gene LinkOut

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