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    Y47H9C.9 Zinc finger PHD-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190000, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Y47H9C.9
    Official Full Name
    Zinc finger PHD-type domain-containing protein
    Primary source
    WormBase:WBGene00012952
    Locus tag
    CELE_Y47H9C.9
    See related
    AllianceGenome:WB:WBGene00012952
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Y47H9C.9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (11898789..11901476, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene NACHT_N domain-containing protein Neighboring gene Mos1 transposase HTH domain-containing protein Neighboring gene pseudo Neighboring gene F-box domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Zinc finger PHD-type domain-containing protein
    NP_493018.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      11898789..11901476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060617.2 → NP_493018.2  Zinc finger PHD-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493018.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWD9
      Conserved Domains (2) summary
      PRK10698
      Location:13 → 172
      PRK10698; phage shock protein PspA; Provisional
      pfam06918
      Location:152 → 367
      DUF1280; Protein of unknown function (DUF1280)
    Nucleotide Protein
    Heading Accession and Version

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