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    LOC100897699 tyrosine kinase receptor Cad96Ca [ Galendromus occidentalis (western predatory mite) ]

    Gene ID: 100897699, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC100897699
    Gene description
    tyrosine kinase receptor Cad96Ca
    See related
    EnsemblRapid:LOC100897699
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Galendromus occidentalis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Phytoseioidea; Phytoseiidae; Typhlodrominae; Galendromus
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    Genomic context

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    See LOC100897699 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current Mocc_1.0 (GCF_000255335.1) Unplaced Scaffold NW_003805464.1 (233752..241972)

    NW_003805464.1Genomic Context describing neighboring genes Neighboring gene LIM/homeobox protein Lhx9-like Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene ankyrin repeat domain-containing protein 54 Neighboring gene DNL-type zinc finger protein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003805464 Unplaced Scaffold Reference Mocc_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane receptor protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine kinase receptor Cad96Ca

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Galendromus occidentalis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mocc_1.0 Primary Assembly

    Genomic

    1. NW_003805464.1 Reference Mocc_1.0 Primary Assembly

      Range
      233752..241972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003744998.1 → XP_003745046.1  tyrosine kinase receptor Cad96Ca

      UniProtKB/TrEMBL
      A0AAJ6VYQ9
      Related
      XP_003745046.1, XM_003744998.1
      Conserved Domains (3) summary
      cd11304
      Location:36 → 120
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00221
      Location:278 → 549
      STYKc; Protein kinase; unclassified specificity
      cd00192
      Location:283 → 550
      PTKc; Catalytic domain of Protein Tyrosine Kinases
    Nucleotide Protein
    Heading Accession and Version

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