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    PUNSTDRAFT_100088 ArfGap-domain-containing protein [ Punctularia strigosozonata HHB-11173 SS5 ]

    Gene ID: 18875529, updated on 2-Jan-2024

    Summary

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    Gene symbol
    PUNSTDRAFT_100088
    Gene description
    ArfGap-domain-containing protein
    Locus tag
    PUNSTDRAFT_100088
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Punctularia strigosozonata HHB-11173 SS5 (strain: HHB-11173 SS5)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Corticiales; Punctulariaceae; Punctularia
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    Genomic context

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    See PUNSTDRAFT_100088 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    6

    NW_006767436.1Genomic Context describing neighboring genes Neighboring gene DUF1960-domain-containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006767436.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ArfGap-domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006767436.1 Reference assembly

      Range
      1002207..1003891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007381962.1 → XP_007382024.1  ArfGap-domain-containing protein [Punctularia strigosozonata HHB-11173 SS5]

      See identical proteins and their annotated locations for XP_007382024.1

      Status: PROVISIONAL

      Conserved Domains (2) summary
      COG5347
      Location:16 → 260
      COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
      pfam01412
      Location:8 → 126
      ArfGap; Putative GTPase activating protein for Arf
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases