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    UHO2_05136 uncharacterized protein [ Ustilago hordei ]

    Gene ID: 64865558, updated on 25-Jan-2024

    Summary

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    Gene symbol
    UHO2_05136
    Gene description
    uncharacterized protein
    Locus tag
    UHO2_05136
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ustilago hordei (strain: Uho2)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago
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    Genomic context

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    See UHO2_05136 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_024545263.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene putative MGM101 - mitochondrial genome maintenance protein Neighboring gene putative RPL37A - ribosomal protein L37.e Neighboring gene putative RPL30 - 60S large subunit ribosomal protein L30.e

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024545263.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II C-terminal domain phosphoserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cdc73/Paf1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_041412072.1
    • related to LEO1 - component of the Paf1 complex

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_024545263.1 Reference assembly

      Range
      223615..225516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041556138.1 → XP_041412072.1  uncharacterized protein UHO2_05136 [Ustilago hordei]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I2FQV3
      Conserved Domains (1) summary
      pfam04004
      Location:207 → 430
      Leo1; Leo1-like protein
    Nucleotide Protein
    Heading Accession and Version