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    HDAC3 histone deacetylase 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704467, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HDAC3provided by VGNC
    Official Full Name
    histone deacetylase 3provided by VGNC
    Primary source
    VGNC:VGNC:73359
    Locus tag
    EGK_16958
    See related
    Ensembl:ENSMMUG00000012588
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HDAC3 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (139000766..139018221, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (139395224..139411991, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene protocadherin gamma-A6 Neighboring gene protocadherin gamma subfamily C, 5 Neighboring gene diaphanous related formin 1 Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene FCH and double SH3 domains 1 Neighboring gene RELT like 2 Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone deacetylase 3
    NP_001253426.1
    XP_028705021.1
    XP_028705022.1
    XP_028705023.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266497.2 → NP_001253426.1  histone deacetylase 3

      See identical proteins and their annotated locations for NP_001253426.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048592
      UniProtKB/TrEMBL
      A0A8J8YMG0, F6V5K8, F7FDY7, G7MVB7, H9G1C1
      Related
      ENSMMUP00000033970.3, ENSMMUT00000040940.3
      Conserved Domains (1) summary
      cd10005
      Location:3 → 383
      HDAC3; Histone deacetylase 3 (HDAC3)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      139000766..139018221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849188.1 → XP_028705021.1  histone deacetylase 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AQ67
      Conserved Domains (1) summary
      cd10005
      Location:3 → 383
      HDAC3; Histone deacetylase 3 (HDAC3)

    2. XM_028849190.1 → XP_028705023.1  histone deacetylase 3 isoform X3

      UniProtKB/TrEMBL
      G7MPX3
      Related
      ENSMMUP00000074707.1, ENSMMUT00000085226.1
      Conserved Domains (1) summary
      cl17011
      Location:1 → 196
      Arginase_HDAC; Arginase-like and histone-like hydrolases

    3. XM_028849189.1 → XP_028705022.1  histone deacetylase 3 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AQ67
      Conserved Domains (1) summary
      cl17011
      Location:12 → 300
      Arginase_HDAC; Arginase-like and histone-like hydrolases
    Nucleotide Protein
    Heading Accession and Version

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