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    CTNNA2 catenin alpha 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712135, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CTNNA2provided by VGNC
    Official Full Name
    catenin alpha 2provided by VGNC
    Primary source
    VGNC:VGNC:71543
    Locus tag
    EGK_05497
    See related
    Ensembl:ENSMMUG00000000293
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CTNNA2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (27964763..29138405, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (80859999..82035734)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671824 Neighboring gene ankyrin repeat domain-containing protein 11-like Neighboring gene leydig cell tumor 10 kDa protein homolog pseudogene Neighboring gene uncharacterized LOC114671921 Neighboring gene uncharacterized LOC114671922 Neighboring gene leucine rich repeat transmembrane neuronal 1 Neighboring gene uncharacterized LOC114671926 Neighboring gene uncharacterized LOC114671923 Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables beta-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    catenin alpha-2
    Names
    catenin (cadherin-associated protein), alpha 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266343.1 → NP_001253272.1  catenin alpha-2

      See identical proteins and their annotated locations for NP_001253272.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320101
      UniProtKB/TrEMBL
      F7A9R5
      Related
      ENSMMUP00000000397.2, ENSMMUT00000000428.4
      Conserved Domains (1) summary
      pfam01044
      Location:81 → 866
      Vinculin; Vinculin family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      27964763..29138405 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112725.2 → XP_014968211.1  catenin alpha-2 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XFK0, F6YFG3, G7NAG9
      Conserved Domains (1) summary
      pfam01044
      Location:81 → 914
      Vinculin; Vinculin family

    2. XM_015112724.2 → XP_014968210.1  catenin alpha-2 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XFK0, F6YFG3, G7NAG9
      Related
      ENSMMUP00000036414.1, ENSMMUT00000043414.3
      Conserved Domains (1) summary
      pfam01044
      Location:81 → 914
      Vinculin; Vinculin family

    3. XM_028831580.1 → XP_028687413.1  catenin alpha-2 isoform X2

      Conserved Domains (1) summary
      pfam01044
      Location:1 → 546
      Vinculin; Vinculin family

    4. XM_015112726.2 → XP_014968212.1  catenin alpha-2 isoform X3

      Conserved Domains (1) summary
      pfam01044
      Location:1 → 498
      Vinculin; Vinculin family

    5. XM_028831581.1 → XP_028687414.1  catenin alpha-2 isoform X2

      Conserved Domains (1) summary
      pfam01044
      Location:1 → 546
      Vinculin; Vinculin family
    Nucleotide Protein
    Heading Accession and Version

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