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    TPHA0C04610 Smc5-Smc6 complex subunit NSE4 [ Tetrapisispora phaffii CBS 4417 ]

    Gene ID: 11533927, updated on 6-Dec-2024

    Summary

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    Gene symbol
    TPHA0C04610
    Gene description
    Smc5-Smc6 complex subunit NSE4
    Locus tag
    TPHA_0C04610
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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    Genomic context

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    See TPHA0C04610 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_016522.1 (998175..999416, complement)

    Chromosome 3 - NC_016522.1Genomic Context describing neighboring genes Neighboring gene type I HSP40 co-chaperone HLJ1 Neighboring gene aminophospholipid-translocating P4-type ATPase DNF3 Neighboring gene ubiquitin-ubiquitin ligase HUL5 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016522.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Smc5-Smc6 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Smc5-Smc6 complex subunit NSE4
    XP_003685045.1
    • similar to Saccharomyces cerevisiae NSE4 (YDL105W); ancestral locus Anc_2.342

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016522.1 Reference assembly

      Range
      998175..999416 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003684997.1 → XP_003685045.1  Smc5-Smc6 complex subunit NSE4 [Tetrapisispora phaffii CBS 4417]

      See identical proteins and their annotated locations for XP_003685045.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G8BQU9
      Conserved Domains (3) summary
      COG5125
      Location:83 → 413
      COG5125; Uncharacterized conserved protein [Function unknown]
      pfam08743
      Location:315 → 413
      Nse4_C; Nse4 C-terminal
      pfam15412
      Location:89 → 139
      Nse4-Nse3_bdg; Binding domain of Nse4/EID3 to Nse3-MAGE
    Nucleotide Protein
    Heading Accession and Version

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