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    LOC100843411 UDP-rhamnose/UDP-galactose transporter 4 [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100843411, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100843411
    Gene description
    UDP-rhamnose/UDP-galactose transporter 4
    Locus tag
    BRADI_4g43730v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100843411 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 4 NC_016134.3 (47278636..47282804)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 4 NC_016134.2 (47458944..47463093)

    Chromosome 4 - NC_016134.3Genomic Context describing neighboring genes Neighboring gene alpha-L-arabinofuranosidase 1 Neighboring gene histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene metal tolerance protein 1 Neighboring gene uncharacterized LOC112272471

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-galactose transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-rhamnose/UDP-galactose transporter 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016134.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      47278636..47282804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003578937.4 → XP_003578985.1  UDP-rhamnose/UDP-galactose transporter 4

      UniProtKB/TrEMBL
      I1IUS9
      Conserved Domains (1) summary
      pfam03151
      Location:41 → 262
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein Strain
    Heading Accession and Version

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