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    LOC100846221 barley B recombinant-like protein A [ Brachypodium distachyon (stiff brome) ]

    Gene ID: 100846221, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100846221
    Gene description
    barley B recombinant-like protein A
    Locus tag
    BRADI_3g21380v3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brachypodium distachyon
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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    Genomic context

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    See LOC100846221 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 3 NC_016133.3 (20500159..20501881)
    102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 3 NC_016133.2 (20484573..20486286)

    Chromosome 3 - NC_016133.3Genomic Context describing neighboring genes Neighboring gene U1 small nuclear ribonucleoprotein 70 kDa Neighboring gene gibberellin-regulated protein 12-like Neighboring gene uncharacterized LOC100845918 Neighboring gene barley B recombinant-like protein A Neighboring gene brassinosteroid LRR receptor kinase BRL2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to ethylene IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    barley B recombinant-like protein A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Genomic

    1. NC_016133.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

      Range
      20500159..20501881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003573700.4 → XP_003573748.1  barley B recombinant-like protein A

      UniProtKB/TrEMBL
      I1I323
      Conserved Domains (1) summary
      pfam06217
      Location:1 → 334
      GAGA_bind; GAGA binding protein-like family
    Nucleotide Protein Strain
    Heading Accession and Version

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