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    LOC100793056 molybdopterin synthase catalytic subunit [ Glycine max (soybean) ]

    Gene ID: 100793056, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC100793056
    Gene description
    molybdopterin synthase catalytic subunit
    Locus tag
    GLYMA_20G043800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100793056 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 20 NC_038256.2 (7959341..7962582, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 20 NC_038256.1 (7966206..7969436, complement)

    Chromosome 20 - NC_038256.2Genomic Context describing neighboring genes Neighboring gene serine carboxypeptidase-like 17 Neighboring gene protein MAIN-LIKE 1-like Neighboring gene pentatricopeptide repeat-containing protein At1g08070, chloroplastic Neighboring gene probable strigolactone esterase DAD2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molybdopterin synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Mo-molybdopterin cofactor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    molybdopterin synthase catalytic subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038256.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      7959341..7962582 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003556749.5 → XP_003556797.1  molybdopterin synthase catalytic subunit

      See identical proteins and their annotated locations for XP_003556797.1

      UniProtKB/TrEMBL
      A0A0R0JDV0, I1NDY4
      Conserved Domains (1) summary
      PLN02390
      Location:30 → 140
      PLN02390; molybdopterin synthase catalytic subunit

    2. XM_006605543.3 → XP_006605606.1  molybdopterin synthase catalytic subunit

      See identical proteins and their annotated locations for XP_006605606.1

      UniProtKB/TrEMBL
      A0A0R0JDV0, I1NDY4
      Conserved Domains (1) summary
      PLN02390
      Location:30 → 140
      PLN02390; molybdopterin synthase catalytic subunit

    3. XM_041013149.1 → XP_040869083.1  molybdopterin synthase catalytic subunit

      UniProtKB/TrEMBL
      A0A0R0JDV0, I1NDY4
      Conserved Domains (1) summary
      PLN02390
      Location:30 → 140
      PLN02390; molybdopterin synthase catalytic subunit
    Nucleotide Protein
    Heading Accession and Version

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