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    LOC100792684 hydrophobic protein RCI2B [ Glycine max (soybean) ]

    Gene ID: 100792684, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100792684
    Gene description
    hydrophobic protein RCI2B
    Locus tag
    GLYMA_19G224802v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100792684 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 19 NC_038255.2 (48226550..48227719)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 19 NC_038255.1 (47701838..47703010)

    Chromosome 19 - NC_038255.2Genomic Context describing neighboring genes Neighboring gene transcription factor MYB61 Neighboring gene transcription factor PIF3 Neighboring gene uncharacterized LOC106797256 Neighboring gene uncharacterized LOC102659914

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hydrophobic protein RCI2B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038255.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      48226550..48227719
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003554548.4 → XP_003554596.1  hydrophobic protein RCI2B

      See identical proteins and their annotated locations for XP_003554596.1

      UniProtKB/TrEMBL
      C6SZM6
      Conserved Domains (1) summary
      pfam01679
      Location:8 → 55
      Pmp3; Proteolipid membrane potential modulator
    Nucleotide Protein
    Heading Accession and Version

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