U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100791987 indole-3-acetic acid-amido synthetase GH3.6 [ Glycine max (soybean) ]

    Gene ID: 100791987, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100791987
    Gene description
    indole-3-acetic acid-amido synthetase GH3.6
    Locus tag
    GLYMA_12G141000v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100791987 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 12 NC_038248.2 (17608119..17611245, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 12 NC_038248.1 (17640965..17644133, complement)

    Chromosome 12 - NC_038248.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100791463 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene uncharacterized LOC102663128 Neighboring gene uncharacterized LOC121173152

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables indole-3-acetic acid amido synthetase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    indole-3-acetic acid-amido synthetase GH3.6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038248.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      17608119..17611245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003540002.5 → XP_003540050.1  indole-3-acetic acid-amido synthetase GH3.6

      UniProtKB/TrEMBL
      I1LSS1
      Conserved Domains (1) summary
      cl21606
      Location:1 → 606
      GH3; GH3 auxin-responsive promoter
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases