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    AOL_s00080g126 hypothetical protein [ Orbilia oligospora ATCC 24927 ]

    Gene ID: 22893693, updated on 11-Apr-2024

    Summary

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    Gene symbol
    AOL_s00080g126
    Gene description
    hypothetical protein
    Locus tag
    AOL_s00080g126
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Orbilia oligospora ATCC 24927 (strain: ATCC 24927, culture-collection: ATCC:24927)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; Orbilia; Orbilia oligospora
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    Genomic context

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    See AOL_s00080g126 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_011645637.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011645637.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in U4 snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear mRNA surveillance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in poly(A)-dependent snoRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in rRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytoplasmic exosome (RNase complex) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear exosome (RNase complex) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_011122803.1
    • AOL_s00080g126 gene product from transcript AOL_s00080g126r

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011645637.1 Reference assembly

      Range
      450696..451529
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011124501.1 → XP_011122803.1  hypothetical protein AOL_s00080g126 [Orbilia oligospora ATCC 24927]

      See identical proteins and their annotated locations for XP_011122803.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7C8MY76, A0A8H2EC95, G1XE91
      Conserved Domains (1) summary
      cd11370
      Location:3 → 237
      RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome
    Nucleotide Protein
    Heading Accession and Version

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