U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    CTHT_0056420 uncharacterized protein [ Thermochaetoides thermophila DSM 1495 ]

    Gene ID: 18259680, updated on 6-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CTHT_0056420
    Gene description
    uncharacterized protein
    Locus tag
    CTHT_0056420
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Thermochaetoides thermophila DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermochaetoides
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CTHT_0056420 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_006383036.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ubr1-like protein Neighboring gene putative cytochrome protein Neighboring gene putative mitochondrial chaperone protein Neighboring gene mitochondrial 37S ribosomal protein uS11m

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_006383036.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exon-exon junction complex disassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of exon-exon junction complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006383036.1 Reference assembly

      Range
      2390073..2390720
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006695903.1 → XP_006695966.1  uncharacterized protein CTHT_0056420 [Thermochaetoides thermophila DSM 1495]

      See identical proteins and their annotated locations for XP_006695966.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G0SC95
      Conserved Domains (1) summary
      pfam09282
      Location:20 → 46
      Mago-bind; Mago binding
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases