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    NEUTE1DRAFT_71412 zinc finger protein white collar 2 [ Neurospora tetrasperma FGSC 2508 ]

    Gene ID: 20829515, updated on 10-Oct-2024

    Summary

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    Gene symbol
    NEUTE1DRAFT_71412
    Gene description
    zinc finger protein white collar 2
    Locus tag
    NEUTE1DRAFT_71412
    See related
    FungiDB:NEUTE1DRAFT_71412; VEuPathDB:NEUTE1DRAFT_71412
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Neurospora tetrasperma FGSC 2508 (strain: FGSC 2508)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora
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    Genomic context

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    See NEUTE1DRAFT_71412 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_009799179.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009799179.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein white collar 2
    XP_009855773.1
    • White collar 2 protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_009799179.1 Reference assembly

      Range
      3169126..3171027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009857471.1 → XP_009855773.1  zinc finger protein white collar 2 [Neurospora tetrasperma FGSC 2508]

      See identical proteins and their annotated locations for XP_009855773.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F8N099
      Conserved Domains (4) summary
      smart00401
      Location:456 → 490
      ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
      cd00130
      Location:171 → 245
      PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
      pfam00320
      Location:460 → 490
      GATA; GATA zinc finger
      pfam08447
      Location:178 → 250
      PAS_3; PAS fold
    Nucleotide Protein
    Heading Accession and Version

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