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    hapless protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835723, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hapless protein
    Primary source
    TAIR:AT5G56240
    Locus tag
    AT5G56240
    See related
    Araport:AT5G56240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K24C1.5; K24C1_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (22759663..22764587, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene prenylated RAB acceptor 1.G2 Neighboring gene hapless 8 Neighboring gene ncRNA Neighboring gene Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001345189.1
    NM_125007.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hapless protein
    NP_001190554.1
    • INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1).
    NP_200435.3
    • BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22759663..22764587 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203625.2 → NP_001190554.1  hapless protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190554.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNZ7, A0A384KS23, A0A5S9YFM2, F4K7K8

    2. NM_001345188.1 → NP_001330447.1  hapless protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNZ7, A0A384KS23, A0A5S9YFM2, F4K7K8

    3. NM_125007.5 → NP_200435.3  hapless protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200435.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UR96, A0A5S9YFM2, F4K7K7

    4. NM_001345189.1 → NP_001330446.1  hapless protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNZ7, A0A384KS23, A0A5S9YFM2, F4K7K8
    Nucleotide Protein
    Heading Accession and Version

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