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    ATMAP4K ALPHA1 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841750, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATMAP4K ALPHA1
    Official Full Name
    Protein kinase superfamily protein
    Primary source
    TAIR:AT1G53165
    Locus tag
    AT1G53165
    See related
    Araport:AT1G53165
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L10.20
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    Genomic context

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    See ATMAP4K ALPHA1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    21
    Sequence:
    Chromosome: 1; NC_003070.9 (19813790..19819564)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene squamosa promoter binding protein-like 4 Neighboring gene ncRNA Neighboring gene membrane-associated kinase regulator Neighboring gene ncRNA Neighboring gene ethylene response factor 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression profiling of the whole Arabidopsis shaggy-like kinase multigene family by real-time reverse transcriptase-polymerase chain reaction. Charrier B, et al. Plant Physiol, 2002 Oct. PMID 12376626, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001198280.1
    NM_001333581.1
    NM_104195.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within hyperosmotic response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Protein kinase superfamily protein
    NP_001185209.1
    • ATMAP4K ALPHA1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response, response to wounding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15220.1).
    NP_001319212.1
    • ATMAP4K ALPHA1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response, response to wounding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15220.1); Has 132200 Blast hits to 130116 proteins in 4312 species: Archae - 185; Bacteria - 15420; Metazoa - 49247; Fungi - 12380; Plants - 32481; Viruses - 583; Other Eukaryotes - 21904 (source: NCBI BLink).
    NP_175724.2
    • ATMAP4K ALPHA1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response, response to wounding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15220.1); Has 132200 Blast hits to 130116 proteins in 4312 species: Archae - 185; Bacteria - 15420; Metazoa - 49247; Fungi - 12380; Plants - 32481; Viruses - 583; Other Eukaryotes - 21904 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19813790..19819564
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333581.1 → NP_001319212.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WLD4, F4HPS1

    2. NM_104195.3 → NP_175724.2  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175724.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJX0, F4HPS0, Q0WUI4, Q8LGU2
      Conserved Domains (2) summary
      smart00220
      Location:19 → 267
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd06609
      Location:14 → 287
      STKc_MST3_like; Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases

    3. NM_001198280.1 → NP_001185209.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185209.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WLD4, F4HPR9
      Conserved Domains (2) summary
      smart00220
      Location:19 → 267
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd06609
      Location:14 → 287
      STKc_MST3_like; Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version

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