U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    arfrp1.S ARF related protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380371, updated on 9-Dec-2024

    Summary

    Official Symbol
    arfrp1.S
    Official Full Name
    ARF related protein 1 S homeolog
    Primary source
    Xenbase:XB-GENE-6251264
    Locus tag
    XELAEV_18046350mg
    See related
    EnsemblRapid:ENSXLAG00005024363 AllianceGenome:Xenbase:XB-GENE-6251264
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    arp; arp1; arl18; arfrp1; cg7039; arfrp1.L
    Summary
    Predicted to enable GTP binding activity and GTPase activity. Predicted to act upstream of or within Golgi to plasma membrane protein transport; intracellular protein transport; and protein localization to Golgi apparatus. Predicted to be located in Golgi apparatus. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See arfrp1.S in Genome Data Viewer
    Location:
    chromosome: 9_10S
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (17471232..17477691)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (16784481..16790969)

    Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene lck-interacting transmembrane adapter 1 Neighboring gene uncharacterized LOC108702673 Neighboring gene TNF receptor superfamily member 6b S homeolog Neighboring gene stathmin 3 S homeolog

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC64400

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC380371
    Names
    ADP ribosylation factor related protein 1 L homeolog
    ADP ribosylation factor related protein 1 S homeolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087210.2NP_001080679.1  uncharacterized protein LOC380371

      See identical proteins and their annotated locations for NP_001080679.1

      Status: PREDICTED

      Source sequence(s)
      BC054219
      UniProtKB/TrEMBL
      A0A974H0I2, A0A974H0I7, Q7SYY5
      Related
      ENSXLAP00005072196.1, ENSXLAT00005073743.1
      Conserved Domains (2) summary
      cd04160
      Location:19186
      Arfrp1; Arf-related protein 1 (Arfrp1)
      pfam00071
      Location:20185
      Ras; Ras family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      17471232..17477691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018237258.2XP_018092747.1  uncharacterized protein LOC380371 isoform X1

      UniProtKB/TrEMBL
      A0A974H0I2, A0A974H0I7, Q7SYY5
      Related
      ENSXLAP00005072163.1, ENSXLAT00005073710.1