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    rpoZ DNA-directed RNA polymerase subunit omega [ Thermus thermophilus HB8 ]

    Gene ID: 3169896, updated on 12-Feb-2024

    Summary

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    Gene symbol
    rpoZ
    Gene description
    DNA-directed RNA polymerase subunit omega
    Locus tag
    TTH_RS07905
    Gene type
    protein coding
    Organism
    Thermus thermophilus HB8 (strain: HB8, type-material: type strain of Thermus thermophilus)
    Lineage
    Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus
    Old locus tag
    TTHA1561
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_006461.1 (1485216..1485515, complement)

    Chromosome 1 - NC_006461.1Genomic Context describing neighboring genes Neighboring gene arginine repressor Neighboring gene bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC Neighboring gene guanylate kinase Neighboring gene glycoside hydrolase family 13 protein Neighboring gene DNA base-flipping protein Neighboring gene SpoIID/LytB domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006461.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ratcheted and ratchetable structural states of RNA polymerase underlie multiple transcriptional functions. Sekine S, et al. Mol Cell, 2015 Feb 5. PMID 25601758
    2. Escherichia coli RNA polymerase subunit omega and its N-terminal domain bind full-length beta' to facilitate incorporation into the alpha2beta subassembly. Ghosh P, et al. Eur J Biochem, 2001 Sep. PMID 11531998
    3. The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo. Gentry D, et al. J Bacteriol, 1991 Jun. PMID 1711031, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit omega
    WP_008633185.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006461.1 Reference assembly

      Range
      1485216..1485515 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_008633185.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Thermus]

      See identical proteins and their annotated locations for WP_008633185.1

      UniProtKB/Swiss-Prot
      Q5SI19, Q72ID6, Q8RQE7
      UniProtKB/TrEMBL
      A0A1J1EUF1, F6DDX4, H7GHJ9, H9ZPY0
      Conserved Domains (1) summary
      PRK00392
      Location:1 → 84
      rpoZ; DNA-directed RNA polymerase subunit omega; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    2O5I_E.1
    2O5I_O.1
    2O5J_E.1
    2O5J_O.1
    2PPB_E.1
    2PPB_O.1
    3AOH_E.1
    3AOH_J.1
    3AOH_O.1
    3AOI_E.1
    3AOI_J.1
    3AOI_O.1
    4G7H_E.1
    4G7H_O.1
    4G7O_E.1
    4G7O_O.1
    4G7Z_E.1
    4G7Z_O.1
    4GZY_E.1
    4GZZ_E.1
    4MQ9_E.1
    4OIN_E.1
    4OIO_E.1
    4OIP_E.1
    4OIQ_E.1
    4OIR_E.1
    4Q4Z_E.1
    4Q5S_E.1
    4WQS_E.1
    4WQS_O.1
    4WQT_E.1
    4WQT_J.1
    4WQT_O.1
    5D4C_E.1
    5D4C_O.1
    5D4D_E.1
    5D4D_O.1
    5D4E_E.1
    5D4E_O.1
    5E17_E.1
    5E18_E.1
    5I2D_E.1
    5I2D_P.1
    5VO8_E.1
    5VOI_E.1
    5XJ0_E.1
    6ASG_E.1
    6KQD_E.1
    6KQD_O.1
    6KQE_E.1
    6KQF_E.1
    6KQG_E.1
    6KQH_E.1
    6KQL_E.1
    6KQM_E.1
    6KQN_E.1
    6L74_E.1
    6LTS_E.1
    6M6A_E.1
    6M6B_E.1
    6M6C_E.1
    6OVR_E.1
    7EH0_E.1
    7EH1_E.1
    7EH2_E.1
    7EH2_O.1
    Q8RQE7.2

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