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    Auxin efflux carrier family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843985, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Auxin efflux carrier family protein
    Primary source
    TAIR:AT1G76520
    Locus tag
    AT1G76520
    See related
    Araport:AT1G76520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14G6.12; F14G6_12; PILS3; PIN-LIKES 3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (28714765..28717910)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Putative AT-hook DNA-binding family protein Neighboring gene ARID/BRIGHT DNA-binding domain-containing protein Neighboring gene Auxin efflux carrier family protein Neighboring gene cyclin-dependent kinase B2;1 Neighboring gene Phosphofructokinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Endoplasmic reticulum stress controls PIN-LIKES abundance and thereby growth adaptation. Waidmann S, et al. Proc Natl Acad Sci U S A, 2023 Aug. PMID 37487064, Free PMC Article
    2. A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Barbez E, et al. Nature, 2012 Apr 15. PMID 22504182
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    5. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PILS3 is a member of the PIN-LIKES (PILS) protein family of putative auxin carriers residing at the endoplasmic reticulum.
      Title: A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_106302.5
    NM_179561.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to cytosol auxin transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    Auxin efflux carrier family protein
    NP_565133.1
    • Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76530.1); Has 676 Blast hits to 645 proteins in 140 species: Archae - 2; Bacteria - 51; Metazoa - 0; Fungi - 244; Plants - 324; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
    NP_849892.1
    • Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76530.1); Has 676 Blast hits to 645 proteins in 140 species: Archae - 2; Bacteria - 51; Metazoa - 0; Fungi - 244; Plants - 324; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28714765..28717910
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179561.4 → NP_849892.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849892.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z2W2, Q9C9K5
      UniProtKB/TrEMBL
      A0A178W0X0, A0A5S9WUW4, Q8LER0
      Conserved Domains (1) summary
      pfam03547
      Location:10 → 382
      Mem_trans; Membrane transport protein

    2. NM_106302.5 → NP_565133.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565133.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z2W2, Q9C9K5
      UniProtKB/TrEMBL
      A0A178W0X0, A0A5S9WUW4, Q8LER0
      Conserved Domains (1) summary
      pfam03547
      Location:10 → 382
      Mem_trans; Membrane transport protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9K5.1

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