Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Adenine nucleotide alpha hydrolases-like superfamily protein
Primary source: TAIR:AT3G58450
Locus tag: AT3G58450
See related: Araport:AT3G58450
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 4

Sequence:: Chromosome: 3; NC_003074.8 (21621994..21623166)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

GRUSP, an Universal Stress Protein, Is Involved in Gibberellin-dependent Induction of Flowering in Arabidopsis thaliana.
Title: GRUSP, an Universal Stress Protein, Is Involved in Gibberellin-dependent Induction of Flowering in Arabidopsis thaliana.
The Gene Encoding the Universal Stress Protein AtUSP is Regulated by Phytohormones and Involved in Seed Germination of Arabidopsis thaliana [USP]
Title: The Gene Encoding the Universal Stress Protein AtUSP is Regulated by Phytohormones and Involved in Seed Germination of Arabidopsis thaliana.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_115707.3

Supported by ESTs:

NM_180386.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within response to abscisic acid	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Adenine nucleotide alpha hydrolases-like superfamily protein

NP_191404.2

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.2); Has 5955 Blast hits to 5729 proteins in 1233 species: Archae - 504; Bacteria - 4276; Metazoa - 131; Fungi - 103; Plants - 779; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).

NP_850717.1

Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 6272 Blast hits to 6041 proteins in 1248 species: Archae - 518; Bacteria - 4566; Metazoa - 135; Fungi - 97; Plants - 787; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

21621994..21623166

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_180386.3 → NP_850717.1 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_850717.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XM69, A0A7G2EYE4, F4J5V2

Conserved Domains (1) summary

cd00293
Location:32 → 180

USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...
NM_115707.3 → NP_191404.2 Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_191404.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VCF6, A0A384KMS3, A0A5S9XM69, Q84JS5

Conserved Domains (1) summary

cd00293
Location:32 → 187

USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...