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    BZIP24 basic leucine zipper 24 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824359, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BZIP24
    Official Full Name
    basic leucine zipper 24
    Primary source
    TAIR:AT3G51960
    Locus tag
    AT3G51960
    See related
    Araport:AT3G51960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBZIP24; basic leucine zipper 24
    Summary
    bZIP transcription factor induced by salt stress and promoted salt tolerance. Localized to the cytoplasm and nucleus under control conditions and targeted preferentially to the nucleus under salt stress
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    Genomic context

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    See BZIP24 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (19282390..19284210, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene oxidoreductase/transition metal ion-binding protein Neighboring gene Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein Neighboring gene ncRNA Neighboring gene acyl-CoA sterol acyl transferase 1 Neighboring gene ARM repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis basic leucine zipper transcription factor AtbZIP24 regulates complex transcriptional networks involved in abiotic stress resistance. Yang O, et al. Gene, 2009 May 1. PMID 19248824
    2. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833
    3. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data concluded that basic leucine zipper transcription factor AtbZIP24 (At3g51960) is an important regulator of salt stress response in plants
      Title: The Arabidopsis basic leucine zipper transcription factor AtbZIP24 regulates complex transcriptional networks involved in abiotic stress resistance.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001339543.1
    NM_115055.3
    NM_180349.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within hyperosmotic salinity response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    NOT involved_in response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to osmotic stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    basic leucine zipper 24
    NP_190764.2
    • basic leucine zipper 24 (BZIP24); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G16770.1); Has 168 Blast hits to 168 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 34; Plants - 132; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_850680.1
    • basic leucine zipper 24 (BZIP24); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G16770.1); Has 159 Blast hits to 159 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 16; Plants - 135; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19282390..19284210 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115055.3 → NP_190764.2  basic leucine zipper 24 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190764.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VG62, A0A384KLK2, A0A654FHR9, F4J5N9
      Conserved Domains (2) summary
      cd14686
      Location:99 → 146
      bZIP; coiled coil [structural motif]
      pfam07716
      Location:104 → 145
      bZIP_2; Basic region leucine zipper

    2. NM_001339543.1 → NP_001325572.1  basic leucine zipper 24 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LLN0, A0A5S9XK86, A0A654FHR9
      Conserved Domains (2) summary
      cd14686
      Location:60 → 107
      bZIP; coiled coil [structural motif]
      pfam07716
      Location:65 → 106
      bZIP_2; Basic region leucine zipper

    3. NM_180349.1 → NP_850680.1  basic leucine zipper 24 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850680.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GTS1, Q9SV08
      UniProtKB/TrEMBL
      A0A654FHR9, A0A7G2EVZ6
      Conserved Domains (2) summary
      cd14686
      Location:98 → 145
      bZIP; coiled coil [structural motif]
      pfam07716
      Location:103 → 144
      bZIP_2; Basic region leucine zipper
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GTS1.1

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