U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    OWL1 DNAJ heat shock N-terminal domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818142, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    OWL1
    Official Full Name
    DNAJ heat shock N-terminal domain-containing protein
    Primary source
    TAIR:AT2G35720
    Locus tag
    AT2G35720
    See related
    Araport:AT2G35720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1; T20F21.9; T20F21_9
    Summary
    Encodes OWL1, a J-domain protein involved in perception of very low light fluences.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See OWL1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Sequence:
    Chromosome: 2; NC_003071.7 (15016656..15020111)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ERF family protein 38 Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. OWL1: an Arabidopsis J-domain protein involved in perception of very low light fluences. Kneissl J, et al. Plant Cell, 2009 Oct. PMID 19808946, Free PMC Article
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_129128.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    NOT involved_in response to high light intensity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to very low light intensity stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within vegetative to reproductive phase transition of meristem IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNAJ heat shock N-terminal domain-containing protein
    NP_181115.2
    • ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, vegetative to reproductive phase transition of meristem, response to very low light intensity stimulus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT3G47940.1); Has 23021 Blast hits to 22960 proteins in 3212 species: Archae - 168; Bacteria - 9682; Metazoa - 3958; Fungi - 2136; Plants - 2202; Viruses - 13; Other Eukaryotes - 4862 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15016656..15020111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129128.4 → NP_181115.2  DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181115.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q39079, Q9SL89
      UniProtKB/TrEMBL
      A0A178VY91, A0A5S9X4T6, A0A7G2EEM0
      Conserved Domains (3) summary
      COG0484
      Location:13 → 90
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:15 → 80
      DnaJ; DnaJ domain
      pfam11875
      Location:396 → 534
      DUF3395; Domain of unknown function (DUF3395)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q39079.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools