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    REP15 RAB15 effector protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709930, updated on 5-Mar-2024

    Summary

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    Gene symbol
    REP15
    Gene description
    RAB15 effector protein
    Locus tag
    EGK_03487
    See related
    Ensembl:ENSMMUG00000053271
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See REP15 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (29009857..29011098)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (28696587..28697828)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene single-pass membrane protein with coiled-coil domains 2 Neighboring gene arginine--tRNA ligase, cytoplasmic-like Neighboring gene PPFIA binding protein 1 Neighboring gene uncharacterized protein C12orf71-like Neighboring gene mitochondrial ribosomal protein S35 Neighboring gene MANSC domain containing 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in receptor recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rab15 effector protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194247.2 → NP_001181176.1  rab15 effector protein

      See identical proteins and their annotated locations for NP_001181176.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000058
      UniProtKB/TrEMBL
      A0A5F8AG01, A0A8J8XBJ4, F7DXW2
      Related
      ENSMMUP00000076804.1, ENSMMUT00000102457.1
      Conserved Domains (1) summary
      pfam15208
      Location:1 → 236
      Rab15_effector; Rab15 effector

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      29009857..29011098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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