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    LOC100266072 protein LAZ1 homolog 1 [ Vitis vinifera (wine grape) ]

    Gene ID: 100266072, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC100266072
    Gene description
    protein LAZ1 homolog 1
    Locus tag
    VIT_00010042001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100266072 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 18 NC_081822.1 (13705311..13718351)
    102 previous assembly 12X (GCF_000003745.3) 18 NC_012024.3 (13786970..13800003)

    Chromosome 18 - NC_081822.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104882622 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene pathogen-related protein Neighboring gene small nucleolar RNA Z221/R21b Neighboring gene pathogen-related protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein LAZ1 homolog 1
    Names
    transmembrane protein 184C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081822.1 Reference ASM3070453v1 Primary Assembly

      Range
      13705311..13718351
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019216730.2 → XP_019072275.1  protein LAZ1 homolog 1 isoform X2

      UniProtKB/TrEMBL
      A5BRQ5

    2. XM_002278048.4 → XP_002278084.1  protein LAZ1 homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_002278084.1

      UniProtKB/TrEMBL
      A0A438DAP8, E0CQP6
      Conserved Domains (1) summary
      pfam03619
      Location:42 → 320
      Solute_trans_a; Organic solute transporter Ostalpha

    3. XM_059734467.1 → XP_059590450.1  protein LAZ1 homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A438DAP8, E0CQP6
    Nucleotide Protein
    Heading Accession and Version

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