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    PSK4 phytosulfokine 4 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824140, updated on 18-Sep-2024

    Summary

    Official Symbol
    PSK4
    Official Full Name
    phytosulfokine 4 precursor
    Primary source
    TAIR:AT3G49780
    Locus tag
    AT3G49780
    See related
    Araport:AT3G49780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPSK3 (FORMER SYMBOL); ATPSK4; phytosulfokine 4 precursor
    Summary
    Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype.
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    Genomic context

    See PSK4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (18465318..18467224)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene Carbohydrate-binding protein Neighboring gene uncharacterized protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    NM_114838.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    acts_upstream_of_or_within plant organ morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in extracellular matrix IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    phytosulfokine 4 precursor
    NP_566926.1
    • phytosulfokine 4 precursor (PSK4); FUNCTIONS IN: growth factor activity; INVOLVED IN: cell proliferation, cell differentiation, response to wounding, organ morphogenesis; LOCATED IN: extracellular matrix; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phytosulfokine (InterPro:IPR009438); BEST Arabidopsis thaliana protein match is: phytosulfokine 5 precursor (TAIR:AT5G65870.1); Has 142 Blast hits to 142 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18465318..18467224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114838.2NP_566926.1  phytosulfokine 4 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566926.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7PCC0, Q8VWK1, Q9M2Y0
      UniProtKB/TrEMBL
      A0A178VNX7, A0A5S9XJN5
      Conserved Domains (1) summary
      pfam06404
      Location:1279
      PSK; Phytosulfokine precursor protein (PSK)