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    LOC9659629 aspartate aminotransferase, mitochondrial [ Selaginella moellendorffii ]

    Gene ID: 9659629, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9659629
    Gene description
    aspartate aminotransferase, mitochondrial
    Locus tag
    SELMODRAFT_83150
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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    Genomic context

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    See LOC9659629 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314266.1 (90877..92872, complement)

    NW_003314266.1Genomic Context describing neighboring genes Neighboring gene early light-induced protein, chloroplastic-like Neighboring gene amino acid transporter AVT6A Neighboring gene uncharacterized LOC9655009 Neighboring gene thioredoxin H-type Neighboring gene lipid transfer-like protein VAS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314266 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-aspartate:2-oxoglutarate aminotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartate aminotransferase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314266.1 Reference v1.0

      Range
      90877..92872 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002964990.2 → XP_002965036.2  aspartate aminotransferase, mitochondrial

      UniProtKB/TrEMBL
      D8R1D2
      Conserved Domains (1) summary
      PLN02397
      Location:13 → 428
      PLN02397; aspartate transaminase
    Nucleotide Protein
    Heading Accession and Version

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