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    LOC9303552 beta-glucosidase 10 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9303552, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9303552
    Gene description
    beta-glucosidase 10
    Locus tag
    ARALYDRAFT_491999
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9303552 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (6041957..6045028)

    NW_003302549.1Genomic Context describing neighboring genes Neighboring gene variant surface antigen E Neighboring gene phytolongin Phyl2.1 Neighboring gene uncharacterized LOC110226010 Neighboring gene uncharacterized protein At4g00950

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-glucosidase 10
    Names
    glycosyl hydrolase family 1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302549.1 Reference v.1.0 Primary Assembly

      Range
      6041957..6045028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002867434.2 → XP_002867480.1  beta-glucosidase 10 isoform X1

      See identical proteins and their annotated locations for XP_002867480.1

      UniProtKB/TrEMBL
      D7MDR3
      Conserved Domains (1) summary
      PLN02814
      Location:1 → 505
      PLN02814; beta-glucosidase

    2. XM_021018720.1 → XP_020874379.1  beta-glucosidase 10 isoform X2

      Conserved Domains (1) summary
      PLN02814
      Location:1 → 533
      PLN02814; beta-glucosidase
    Nucleotide Protein
    Heading Accession and Version

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