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    LOC9302856 3-hydroxyisobutyryl-CoA hydrolase 1 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9302856, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9302856
    Gene description
    3-hydroxyisobutyryl-CoA hydrolase 1
    Locus tag
    ARALYDRAFT_920141
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CHY1
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    Genomic context

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    See LOC9302856 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (22938755..22941711)

    NW_003302548.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9301168 Neighboring gene trafficking protein particle complex subunit 11 Neighboring gene kinesin-like protein KIN-14E Neighboring gene rho GTPase-activating protein gacO

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-hydroxyisobutyryl-CoA hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in valine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    3-hydroxyisobutyryl-CoA hydrolase 1
    Names
    beta-hydroxyisobutyryl-CoA hydrolase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302548.1 Reference v.1.0 Primary Assembly

      Range
      22938755..22941711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002865047.2 → XP_002865093.1  3-hydroxyisobutyryl-CoA hydrolase 1 isoform X2

      See identical proteins and their annotated locations for XP_002865093.1

      UniProtKB/TrEMBL
      D7MNH9
      Conserved Domains (2) summary
      PLN02988
      Location:1 → 381
      PLN02988; 3-hydroxyisobutyryl-CoA hydrolase
      PRK05617
      Location:7 → 353
      PRK05617; 3-hydroxyisobutyryl-CoA hydrolase; Provisional

    2. XM_021025643.1 → XP_020881302.1  3-hydroxyisobutyryl-CoA hydrolase 1 isoform X1

      Conserved Domains (1) summary
      PLN02988
      Location:1 → 384
      PLN02988; 3-hydroxyisobutyryl-CoA hydrolase
    Nucleotide Protein
    Heading Accession and Version

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