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    LOC9302268 phosphatidylserine decarboxylase proenzyme 2 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9302268, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9302268
    Gene description
    phosphatidylserine decarboxylase proenzyme 2
    Locus tag
    ARALYDRAFT_685355
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9302268 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (17982407..17986529, complement)

    NW_003302548.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9302265 Neighboring gene uncharacterized LOC9302267 Neighboring gene uncharacterized LOC110225846 Neighboring gene uncharacterized LOC9302269 Neighboring gene uncharacterized LOC110225903

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylserine decarboxylase proenzyme 2
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302548.1 Reference v.1.0 Primary Assembly

      Range
      17982407..17986529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021025016.1 → XP_020880675.1  phosphatidylserine decarboxylase proenzyme 2

      UniProtKB/TrEMBL
      D7MMT0
      Conserved Domains (1) summary
      PLN02964
      Location:1 → 638
      PLN02964; phosphatidylserine decarboxylase
    Nucleotide Protein
    Heading Accession and Version

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