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    Pmar_PMAR020691 sulfur metabolism negative regulator, putative [ Perkinsus marinus ATCC 50983 ]

    Gene ID: 9041497, updated on 28-Dec-2023

    Summary

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    Gene symbol
    Pmar_PMAR020691
    Gene description
    sulfur metabolism negative regulator, putative
    Locus tag
    Pmar_PMAR020691
    See related
    VectorBase:PMAR020691
    Gene type
    protein coding
    RNA name
    sulfur metabolism negative regulator, putative
    RefSeq status
    PROVISIONAL
    Organism
    Perkinsus marinus ATCC 50983 (strain: ATCC 50983, culture-collection: ATCC:50983)
    Lineage
    Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus
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    Genomic context

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    See Pmar_PMAR020691 in Genome Data Viewer
    Exon count:
    6

    NW_003207677.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Eukaryotic translation initiation factor 4 gamma, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003207677.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    sulfur metabolism negative regulator, putative
    XP_002775708.1
    • encoded by transcript Pmar_PMAR020691-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    mRNA and Protein(s)

    1. XM_002775662.1 → XP_002775708.1  sulfur metabolism negative regulator, putative [Perkinsus marinus ATCC 50983]

      See identical proteins and their annotated locations for XP_002775708.1

      UniProtKB/TrEMBL
      C5L7R2
      Conserved Domains (3) summary
      smart00512
      Location:7 → 117
      Skp1; Found in Skp1 protein family
      COG5201
      Location:8 → 163
      SKP1; SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
      pfam01466
      Location:91 → 167
      Skp1; Skp1 family, dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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