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    COQ4 coenzyme Q4 [ Bos taurus (domestic cattle) ]

    Gene ID: 511987, updated on 27-Nov-2024

    Summary

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    Official Symbol
    COQ4provided by VGNC
    Official Full Name
    coenzyme Q4provided by VGNC
    Primary source
    VGNC:VGNC:59211
    See related
    BGD:BT16531; Ensembl:ENSBTAG00000004664
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See COQ4 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (98918804..98933125)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene SWI5 homologous recombination repair protein Neighboring gene TruB pseudouridine synthase family member 2 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA arginine (anticodon UCU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in ubiquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
    Names
    coenzyme Q biosynthesis protein 4 homolog
    coenzyme Q4 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083672.2 → NP_001077141.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform 3

      See identical proteins and their annotated locations for NP_001077141.1

      Status: PROVISIONAL

      Source sequence(s)
      BC122805
      UniProtKB/Swiss-Prot
      Q05B52
      UniProtKB/TrEMBL
      A0A3Q1M1G1
      Related
      ENSBTAP00000063553.1, ENSBTAT00000066477.2
      Conserved Domains (1) summary
      cl02093
      Location:47 → 134
      Coq4; Coenzyme Q (ubiquinone) biosynthesis protein Coq4

    2. NM_001434745.1 → NP_001421674.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform 1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000011

    3. NM_001434746.1 → NP_001421675.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform 1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000011

    4. NM_001434747.1 → NP_001421676.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform 2

      Status: VALIDATED

      Source sequence(s)
      NKLS02000011

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      98918804..98933125
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005213245.5 → XP_005213302.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1

      UniProtKB/TrEMBL
      F1MJK0
      Conserved Domains (1) summary
      pfam05019
      Location:47 → 266
      Coq4; Coenzyme Q (ubiquinone) biosynthesis protein Coq4

    2. XM_005213246.5 → XP_005213303.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X2

      UniProtKB/TrEMBL
      E1BK08
      Conserved Domains (1) summary
      pfam05019
      Location:47 → 258
      Coq4; Coenzyme Q (ubiquinone) biosynthesis protein Coq4

    3. XM_010810415.4 → XP_010808717.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X5

      Conserved Domains (1) summary
      pfam05019
      Location:1 → 208
      Coq4; Coenzyme Q (ubiquinone) biosynthesis protein Coq4

    4. XM_059891170.1 → XP_059747153.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1

      UniProtKB/TrEMBL
      F1MJK0
      Related
      ENSBTAP00000006120.5, ENSBTAT00000006120.6

    5. XM_059891171.1 → XP_059747154.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X2

      UniProtKB/TrEMBL
      E1BK08
      Related
      ENSBTAP00000053835.3, ENSBTAT00000061485.4

    6. XM_015473620.3 → XP_015329106.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X3

      Conserved Domains (1) summary
      pfam05019
      Location:47 → 217
      Coq4; Coenzyme Q (ubiquinone) biosynthesis protein Coq4

    7. XM_015473621.3 → XP_015329107.1  ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X4

      Conserved Domains (1) summary
      pfam05019
      Location:47 → 185
      Coq4; Coenzyme Q (ubiquinone) biosynthesis protein Coq4
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q05B52.1 GenPept UniProtKB/Swiss-Prot:Q05B52

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