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    SLC9A9 solute carrier family 9 member A9 [ Equus caballus (horse) ]

    Gene ID: 100051114, updated on 24-Nov-2024

    Summary

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    Official Symbol
    SLC9A9provided by VGNC
    Official Full Name
    solute carrier family 9 member A9provided by VGNC
    Primary source
    VGNC:VGNC:23285
    See related
    Ensembl:ENSECAG00000006450
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    NHE-9
    Orthologs
    human mouse all
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    Genomic context

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    See SLC9A9 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (78659872..79170421, complement)

    Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111768437 Neighboring gene uncharacterized LOC102148858 Neighboring gene uncharacterized LOC102148929 Neighboring gene divergent protein kinase domain 2A Neighboring gene uncharacterized LOC111768438

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009159.3 Chromosome 16 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables potassium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of intracellular pH IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/hydrogen exchanger 9
    Names
    Na(+)/H(+) exchanger 9
    sodium/hydrogen exchanger
    solute carrier family 9 (sodium/hydrogen exchanger), member 9
    solute carrier family 9 member 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001434675.1 → NP_001421604.1  sodium/hydrogen exchanger 9

      Status: VALIDATED

      Source sequence(s)
      PJAA01000017

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009159.3 Reference EquCab3.0 Primary Assembly

      Range
      78659872..79170421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001918103.4 → XP_001918138.2  sodium/hydrogen exchanger 9

      UniProtKB/Swiss-Prot
      F7B113
      UniProtKB/TrEMBL
      A0A9L0RFN7
      Related
      ENSECAP00000063551.1, ENSECAT00000126906.1
      Conserved Domains (1) summary
      cl25615
      Location:128 → 541
      NhaP2; NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains [Energy production and conversion, Inorganic ion transport and metabolism]

    RNA

    1. XR_002800813.1 RNA Sequence

      Related
      ENSECAT00000103559.1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F7B113.2 GenPept UniProtKB/Swiss-Prot:F7B113

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